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    Home » Recipes » Cookies and Bars

    Peanut Butter and Jelly Cookies

    Published: Mar 20, 2026

    Note: This site is a participant in the Amazon Associates Program, an affiliate advertising program designed to provide a means for the site to earn fees by linking to Amazon and affiliated sites.

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    Jump to Recipe -

    These Keto Peanut Butter and Jelly cookies are some of the most fun (& tasty!) low carb thumbprint cookies out there! Easy to make, too!

    A plate of low carb peanut butter and jelly cookies, topped with sugar free blueberry and sugar free strawberry jam. Overlaid text says keto peanut butter and jelly cookies.

    Keto peanut butter cookies have gone a long way to keeping me on track, and my gluten free, low carb peanut butter cookie dough has been used as a base for several delicious cookies that I’ve already featured on this blog.

    Last year, I decided to use that classic peanut butter cookie base to create a new recipe for buttery peanut butter cookies.

    Based around a favourite childhood sandwich, these chewy peanut butter cookies are basically a pb&j sandwich, in cookie form!

    The thumbprint style of cookie lends itself really well to the classic flavor pairing, with chewy peanut butter cookies making a great base for the little hit of jam on top of each.

    It’s a great recipe for the holiday season, because it’s something that everyone loves - whether they’re gluten free and/or low carb themselves, or not. It’s always nice to be able to serve a single batch of cookies to a mixed crowd - they’re dietarily inclusive!

    Don’t feel like you’ve got to reserve them for the Christmas season, though - while pretty, they still work really well as casual, everyday cookies!

    About the Carb Count

    About 4.5 grams of carbs per cookie are coming from the allulose (deductible).

    Add that to the 1 grams of fiber, and you're left with about 2.5 net grams of carbs per cookie!

    Anyway, let’s look at the ingredients you’ll need for this low carb, gluten free peanut butter and jelly cookie recipe!

    A plate of low carb peanut butter thumbprint cookies, topped with sugar free blueberry and sugar free strawberry jam.

    Ingredients

    This keto PB&J cookie recipe uses fairly simple ingredients, for anyone that’s been doing any keto baking. You shouldn’t have any trouble finding everything you need in any larger grocery store.

    As always, I have a few ingredient notes for you:

    Smooth Peanut Butter

    All of the peanut butter flavor in these chewy cookies comes from the creamy peanut butter used.

    Look for a natural peanut butter without added sugar, when possible.

    Also, if you REALLY want to use crunchy peanut butter, you’ll need to use a bit extra, to make up for the volume lost to the peanut pieces.

    I’d add probably 2 tablespoon - ¼ cup worth, and see how that goes.

    Sugar Free Raspberry Jam

    As jelly thumbprint cookies, there are all kinds of different jams and jellies you can use. It’s just a matter of which favorite jelly fits your macros!

    I use sugar free raspberry preserves, as that’s my favourite of the low sugar jam options locally. I can usually find some store of strawberry jelly / strawberry preserves / strawberry jam, which also works well.

    grape jelly would also be fantastic, I just haven’t happened across a sugar free version, locally!

    Maybe sugar free blueberry jam would be a decent alternative? I’ve never used blueberry jam in peanut butter & jelly sandwiches, though!

    The “Flour” Mixture

    I use a mix of 3 flour alternatives - Super Fine Almond Flour, Vanilla Flavored Whey Protein Powder, and Coconut Flour - along with a little Xanthan Gum.

    This is pretty much by go-to mix to replace all purpose flour in my keto cookie recipes. It’s low carb, tastes great, gives you a great texture, and you even get a bit of protein out of it!

    As far as the protein powder goes, I use Revolution Nutrition's High Whey in Vanilla Cake, but any brand should work.

    Just be sure to use one that you love the taste of, and that suits your macros.

    Sweeteners

    I use two different sweeteners in this keto cookie recipe, for the best peanut butter cookies possible. Much more like my traditional peanut butter cookies, than just using a white sugar substitute.

    For me, this means using both Brown Allulose - as a brown sugar replacement - and Granulated Allulose, as a white sugar replacement.

    When using allulose, I use ⅓ cup each.

    If you’d prefer to use Erythritol / Monkfruit Blend Sweeteners - like Swerve Granular Sweetener and Swerve Brown Sugar Substitute - use ¼ cup instead.

    Personally, I’m not a fan of the taste / mouth cooling sensation that comes with erythritol. Also, there’s been some concerning data coming out about it in the past few years.

    Everything Else

    Rounding out this recipe, you will need:

    Unsweetened Almond Milk (or other milk of choice)
    Large Eggs
    Pure Vanilla extract
    Baking Powder
    Xanthan Gum
    Baking Soda
    Salt

    ... I just don’t have anything else to add, as far as these last few ingredients go!

    A plate of keto peanut butter thumbprint cookies, topped with sugar free blueberry and sugar free strawberry jam.

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    Before you chow down, be sure to take some pics of your handiwork! If you post it to Bluesky, be sure to tag us - @CelebrationGen. We're also on Pinterest, so you can save all your favourite recipes to a board!

    Also, be sure to subscribe to my free email newsletter, so you never miss out on any of my nonsense. Well, the published nonsense, anyway!

    How to Make Keto Peanut Butter & Jelly Cookies

    The full recipe is in the printable recipe card at the end of this post, here is a visual walk through.

    Keto Peanut Butter Cookie Dough:

    In stand mixer fit with a paddle attachment - or in a large mixing bowl if using an electric hand mixer - cream butter, peanut butter, and sugar substitutes on medium-high speed until fluffy.

    Add eggs, milk, and vanilla, beat until everything is fully incorporated and smooth.

    5 part image showing the peanut butter, sweeteners, eggs, and vanilla being creamed.

    In a separate bowl, mix together remaining ingredients.

    2 part image showing the dry ingredients being mixed.

    Slowly add this dry ingredients mix to the mixer bowl of wet ingredients, and carefully mix until well incorporated and smooth.

    6 part image showing the dry ingredients being beaten into the wet mixture a bit at a time to form a keto peanut butter cookie dough.

    Wrap with plastic wrap, let dough chill for 1 hour.

    The keto peanut butter cookie dough being wrapped in plastic wrap.

    Making the Keto Peanut Butter Thumbprint Cookies

    Preheat the oven to 350 F, line baking sheets with parchment paper.

    Roll 1" balls of cookie dough, or use a cookie scoop. You want to get about 30 cookies from the batch.

    Arrange dough balls on a prepared baking sheet, leaving at least 2" between cookies - they flatten out a fair amount.

    If you don’t leave enough space, you might end up with conjoined cookies! Note: The degree of spread can vary based on the sweetener used.

    2 part image showing the keto peanut butter cookie dough being rolled into small balls.

    Gently press the tops of each slightly. Flatten each just a little bit - enough to prevent the dough from rolling.

    Use your thumb to form a round, shallow indentation center of each cookie.

    2 part image showing the keto peanut butter cookie dough balls being arranged on parchment lined baking sheets and having thumb prints pressed into them.

    Place about 1 teaspoon of sugar free raspberry jam in the middle of the cookie.

    Bake for 11-13 minutes. Cookies will be golden brown and look puffy, but they flatten out as they cool. For best results, do not over bake!

    2 part image showing the keto peanut butter thumbprint cookies being topped with sugar free jam, then baked.

    Allow cookies to cool for 2 minutes before removing from baking sheets. You can transfer them to a wire rack to finish cooling to room temperature, if you like.

    Cool completely before storing in an airtight container.

    Once cooled to room temperature, cookies can be stored in an airtight container for a few days on the counter, longer if in the fridge.

    A plate of keto peanut butter and jelly cookies, topped with sugar free blueberry and sugar free strawberry jam.

    More Keto Cookie Recipes

    Looking to indulge your sweet tooth in a way that won’t spike your blood sugar? Here are some delicious recipes for low carb cookies to try!

    Apple Pie Cookies
    Biscotti
    Candy Cane Cookies
    Chocolate Chip Cookies
    Chocolate Peanut Butter Cookies
    Chocolate Protein Cookies
    Cowboy Cookies
    Gingerbread Cookies
    Ladyfingers
    Lemon Cookies
    Peanut Butter Chocolate Chip Cookies
    Peanut Butter Pecan Chocolate Chip Cookies
    Pecan Pie Cookies
    Pumpkin Spice Cookies
    Red Velvet Cookies
    Rolled Sugar Cookies
    Snickerdoodles
    Soft Peanut Butter Cookies
    Sugar Free Royal Icing
    Triple Chocolate Cookies
    Valentine’s Chocolate Thumbprint Cookies
    White Chocolate Peppermint Cookies
    Witch Finger Cookies

    ... but wait, there's more! We have a desserts section for keto recipes - Keto Dessert Recipes! Check it out!

    A plate of low carb peanut butter and jelly cookies, topped with sugar free blueberry and sugar free strawberry jam.

    A plate of keto peanut butter thumbprint cookies, topped with sugar free blueberry and sugar free strawberry jam.
    Print Recipe Pin Recipe Save Recipe Saved!
    5 from 1 vote

    Keto Peanut Butter & Jelly Cookies [Low Carb & Gluten Free]

    These Keto Peanut Butter and Jelly cookies are some of the most fun (& tasty!) low carb thumbprint cookies out there! Easy to make, too!
    Prep Time20 minutes mins
    Cook Time11 minutes mins
    Chill Time1 hour hr
    Total Time1 hour hr 31 minutes mins
    Course: Dessert, Snack
    Cuisine: American
    Diet: Diabetic, Gluten Free, Vegetarian
    Servings: 30 Cookies
    Calories: 69kcal

    Equipment

    • 2 large baking sheets
    • Parchment paper

    Ingredients

    • ¾ cup Smooth peanut butter
    • ⅓ cup Brown Allulose ¼ cup for erythritol blend
    • ⅓ cup Granulated Allulose ¼ cup for erythritol blend
    • 2 Large eggs
    • 1 tablespoon Unsweetened Almond Milk
    • 2 teaspoon Vanilla extract
    • ½ cup Superfine Almond Flour
    • ½ cup Vanilla Whey Protein Powder
    • ¼ cup Coconut flour
    • ½ teaspoon Baking powder
    • ½ teaspoon Salt
    • ½ teaspoon Xanthan gum
    • ¼ teaspoon Baking soda
    • ¼ cup Sugar free Raspberry Jam

    Instructions

    Keto Peanut Butter Cookie Dough:

    • In stand mixer - or in a large bowl if using an electric mixer - cream butter, peanut butter, and sugar substitutes until fluffy.
    • Add eggs, milk, and vanilla, beat until everything is fully incorporated and smooth.
    • In a separate medium bowl, mix together remaining ingredients.
    • Slowly add this dry ingredients mix to the mixer bowl, and carefully mix until well incorporated and smooth.
    • Cover dough with plastic wrap, chill for 1 hour.

    Making the Keto Peanut Butter Thumbprint Cookies

    • Preheat the oven to 350 F, line baking sheets with parchment paper.
    • Roll 1" balls of cookie dough, or use an ice cream scoop. You want to get about 30 cookies from the batch.
    • Arrange dough balls on a cookie sheet, leaving at least 2" between cookies - they flatten out a fair amount.
    • Gently press the tops of each slightly - flatten JUST enough to prevent the dough from rolling.
    • Use your thumb to form a round, shallow indentation in the center of the dough.
    • Fill each indentation with about 1 teaspoon of sugar free raspberry jam.
    • Bake for 11-13 minutes. Cookies will look puffy, but flatten out as they cool. Do not over bake!
    • Allow cookies to cool for 2 minutes before removing from baking sheets. You can transfer them to a cooling rack, if you like.
      Cool completely before storing in an airtight container.
    • Once cooled to room temperature, cookies can be stored in an airtight container for a few days on the counter, longer if in the fridge.

    Notes

    About 4.5 grams of carbs per cookie are coming from the allulose (deductible). Add that to the 1 grams of fiber, and you're left with about 2.5 net grams of carbs per cookie

    Nutrition

    Serving: 1cookie | Calories: 69kcal | Carbohydrates: 8g | Protein: 4g | Fat: 5g | Saturated Fat: 1g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 2g | Trans Fat: 0.001g | Cholesterol: 15mg | Sodium: 97mg | Potassium: 48mg | Fiber: 1g | Sugar: 2g | Vitamin A: 16IU | Calcium: 23mg | Iron: 0.3mg

    A plate of keto peanut butter thumbprint cookies, topped with sugar free blueberry and sugar free strawberry jam.

    Thanks for Reading!

    ... and hey, if you love the recipe, please consider leaving a star rating and comment!
    (Sharing the post on social media is always appreciated, too!)

    A plate of low carb peanut butter thumbprint cookies, topped with sugar free blueberry and sugar free strawberry jam.

    A plate of keto peanut butter and jelly cookies, topped with sugar free blueberry and sugar free strawberry jam.

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    Reader Interactions

    Comments

    1. Marie Porter

      March 09, 2026 at 9:58 am

      5 stars
      A fun cookie recipe, that satisfies multiple cravings at once! Hope you love the recipe as much as we do!

      Reply
    5 from 1 vote

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